HPV Target gene Detail Information

> FYB1 Gene Search Result


Gene Information
Gene Name FYB1
Gene ID 2533
Gene Full Name FYN binding protein 1
Gene Alias ADAP|FYB|PRO0823|SLAP-130|SLAP130|THC3
Transcripts ENSG00000082074
Virus HPV
Gene Type protein-coding
HPA Location Info Plasma membrane;Nucleoplasm;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID O15117
HGNC ID HGNC:4036
OMIM ID 602731
Summary The protein encoded by this gene is an adapter for the FYN protein and LCP2 signaling cascades in T-cells. The encoded protein is involved in platelet activation and controls the expression of interleukin-2. Three transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2011]
Target gene [FYB1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5009939 chr5 17 40 36 93 View
5013585 chr5 14 169 205 388 View
5013586 chr5 127 9 10 146 View
5013587 chr5 288 280 338 906 View
5013588 chr5 47 0 3 50 View
5013589 chr5 6 2 0 8 View

Target gene [FYB1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
S
  GSE164690
scRNA-seq 51 Illumina NextSeq 500 (Homo sapiens)
S
  GSE197461
scRNA-seq 16 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a feature/violin plot will be displayed.


> Dataset: GSE164690 - Gene expression in cell subsets

> Dataset: GSE197461 - Gene expression in cell subsets