HTLV1 Target gene Detail Information

> GABRA3 Gene Search Result


Gene Information
Gene Name GABRA3
Gene ID 2556
Gene Full Name gamma-aminobutyric acid type A receptor subunit alpha3
Gene Alias EPILX2
Transcripts ENSG00000011677
Virus HTLV1
Gene Type protein-coding
HPA Location Info Plasma membrane;Nucleoplasm;
Membrane Info FDA approved drug targets, Predicted membrane proteins, Transporters
Uniport_ID P34903
HGNC ID HGNC:4077
OMIM ID 305660
Summary GABA is the major inhibitory neurotransmitter in the mammalian brain where it acts at GABA-A receptors, which are ligand-gated chloride channels. Chloride conductance of these channels can be modulated by agents such as benzodiazepines that bind to the GABA-A receptor. At least 16 distinct subunits of GABA-A receptors have been identified. [provided by RefSeq, Jul 2008]
Target gene [GABRA3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6016629 chrX 2 4 6 12 View
6021043 chrX 5 1 0 6 View
6029478 chrX 1 0 0 1 View
6029962 chrX 1 0 0 1 View

Target gene [GABRA3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - GABRA3 peak across samples

Peak Plot