HTLV1 Target gene Detail Information

> GALK2 Gene Search Result


Gene Information
Gene Name GALK2
Gene ID 2585
Gene Full Name galactokinase 2
Gene Alias GK2
Transcripts ENSG00000156958
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm, Cytosol;
Membrane Info Enzymes, Metabolic proteins, Predicted intracellular proteins
Uniport_ID Q01415
HGNC ID HGNC:4119
OMIM ID 137028
Summary This gene encodes a highly efficient N-acetylgalactosamine (GalNAc) kinase, which has galactokinase activity when galactose is present at high concentrations. The encoded protein is a member of the GHMP kinase family. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jun 2017]
Target gene [GALK2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6007704 chr15 39 13 0 52 View
6008103 chr15 39 7 2 48 View
6011919 chr15 10 14 0 24 View

Target gene [GALK2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - GALK2 peak across samples

Peak Plot