HTLV1 Target gene Detail Information

> GEMIN2 Gene Search Result


Gene Information
Gene Name GEMIN2
Gene ID 8487
Gene Full Name gem nuclear organelle associated protein 2
Gene Alias SIP1|SIP1-delta
Transcripts ENSG00000092208
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm, Nuclear bodies;Nucleoli;
Membrane Info Predicted intracellular proteins
Uniport_ID O14893
HGNC ID HGNC:10884
OMIM ID 602595
Summary This gene encodes one of the proteins found in the SMN complex, which consists of several gemin proteins and the protein known as the survival of motor neuron protein. The SMN complex is localized to a subnuclear compartment called gems (gemini of coiled bodies) and is required for assembly of spliceosomal snRNPs and for pre-mRNA splicing. This protein interacts directly with the survival of motor neuron protein and it is required for formation of the SMN complex. A knockout mouse targeting the mouse homolog of this gene exhibited disrupted snRNP assembly and motor neuron degeneration. [provided by RefSeq, Aug 2011]
Target gene [GEMIN2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6007347 chr14 55 1 0 56 View
6007364 chr14 56 0 0 56 View
6031748 chr14 0 0 0 0 View

Target gene [GEMIN2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - GEMIN2 peak across samples

Peak Plot