HTLV1 Target gene Detail Information

> GFM1 Gene Search Result


Gene Information
Gene Name GFM1
Gene ID 85476
Gene Full Name G elongation factor mitochondrial 1
Gene Alias COXPD1|EFG|EFG1|EFGM|EGF1|GFM|hEFG1|mtEF-G1
Transcripts ENSG00000168827
Virus HTLV1
Gene Type protein-coding
HPA Location Info Mitochondria;Nucleoplasm;
Membrane Info Disease related genes, Human disease related genes, Metabolic proteins, Predicted intracellular proteins
Uniport_ID Q96RP9
HGNC ID HGNC:13780
OMIM ID 606639
Summary Eukaryotes contain two protein translational systems, one in the cytoplasm and one in the mitochondria. Mitochondrial translation is crucial for maintaining mitochondrial function and mutations in this system lead to a breakdown in the respiratory chain-oxidative phosphorylation system and to impaired maintenance of mitochondrial DNA. This gene encodes one of the mitochondrial translation elongation factors. Its role in the regulation of normal mitochondrial function and in different disease states attributed to mitochondrial dysfunction is not known. [provided by RefSeq, Jul 2008]
Target gene [GFM1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002254 chr3 23 224 17 264 View
6030518 chr3 0 0 0 0 View
6030545 chr3 0 0 0 0 View
6030617 chr3 0 0 0 0 View

Target gene [GFM1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - GFM1 peak across samples

Peak Plot