HTLV1 Target gene Detail Information

> GKN2 Gene Search Result


Gene Information
Gene Name GKN2
Gene ID 200504
Gene Full Name gastrokine 2
Gene Alias BRICD1B|GDDR|PRO813|TFIZ1|VLTI465
Transcripts ENSG00000183607
Virus HTLV1
Gene Type protein-coding
HPA Location Info Secreted to digestive system;
Membrane Info Predicted secreted proteins
Uniport_ID Q86XP6
HGNC ID HGNC:24588
OMIM ID 618589
Summary The secretory protein encoded by this gene is produced in gastric surface mucous cells, where it can bind trefoil factor family peptide 1 or gastrokine-1. This gene may be a tumor suppressor gene, as its expression is markedly decreased in gastric cancer tissues. The encoded protein interacts with gastrokine-1 and regulates homeostasis of the gastric mucosa. [provided by RefSeq, Dec 2015]
Target gene [GKN2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6018170 chr2 9 0 0 9 View

Target gene [GKN2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
M
  GSE136189
Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE94732 - GKN2 peak across samples

Peak Plot