HTLV1 Target gene Detail Information

> GPC5 Gene Search Result


Gene Information
Gene Name GPC5
Gene ID 2262
Gene Full Name glypican 5
Gene Alias -
Transcripts ENSG00000179399
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;Cytosol;Intracellular and membrane;
Membrane Info Predicted intracellular proteins
Uniport_ID P78333
HGNC ID HGNC:4453
OMIM ID 602446
Summary Cell surface heparan sulfate proteoglycans are composed of a membrane-associated protein core substituted with a variable number of heparan sulfate chains. Members of the glypican-related integral membrane proteoglycan family (GRIPS) contain a core protein anchored to the cytoplasmic membrane via a glycosyl phosphatidylinositol linkage. These proteins may play a role in the control of cell division and growth regulation. [provided by RefSeq, Jul 2008]
Target gene [GPC5] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6011593 chr13 1 23 2 26 View
6015038 chr13 14 1 0 15 View
6015449 chr13 6 2 6 14 View
6022865 chr13 4 0 0 4 View
6022878 chr13 4 0 0 4 View
6023271 chr13 4 0 0 4 View
6025337 chr13 3 0 0 3 View
6027212 chr13 2 0 0 2 View
6027377 chr13 0 2 0 2 View
6030019 chr13 0 0 1 1 View
6030354 chr13 1 0 0 1 View
6032586 chr13 0 0 0 0 View
6033026 chr13 0 0 0 0 View
6033198 chr13 0 0 0 0 View
6033251 chr13 0 0 0 0 View

Target gene [GPC5] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - GPC5 peak across samples

Peak Plot