HTLV1 Target gene Detail Information

> GPR39 Gene Search Result


Gene Information
Gene Name GPR39
Gene ID 2863
Gene Full Name G protein-coupled receptor 39
Gene Alias ZnR
Transcripts ENSG00000183840
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info G-protein coupled receptors, Predicted membrane proteins, Transporters
Uniport_ID O43194
HGNC ID HGNC:4496
OMIM ID 602886
Summary This gene is a member of the ghrelin receptor family and encodes a rhodopsin-type G-protein-coupled receptor (GPCR). The encoded protein is involved in zinc-dependent signaling in epithelial tissue in intestines, prostate and salivary glands. The protein may also be involved in the pathophysiology of depression. [provided by RefSeq, Jun 2016]
Target gene [GPR39] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002450 chr2 67 112 62 241 View
6014519 chr2 3 7 6 16 View
6020208 chr2 5 2 0 7 View
6021329 chr2 2 4 0 6 View

Target gene [GPR39] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - GPR39 peak across samples

Peak Plot