HTLV1 Target gene Detail Information

> GRID2 Gene Search Result


Gene Information
Gene Name GRID2
Gene ID 2895
Gene Full Name glutamate ionotropic receptor delta type subunit 2
Gene Alias GluD2|SCAR18
Transcripts ENSG00000152208
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID O43424
HGNC ID HGNC:4576
OMIM ID 602368
Summary The protein encoded by this gene is a member of the family of ionotropic glutamate receptors which are the predominant excitatory neurotransmitter receptors in the mammalian brain. The encoded protein is a multi-pass membrane protein that is expressed selectively in cerebellar Purkinje cells. A point mutation in the mouse ortholog, associated with the phenotype named 'lurcher', in the heterozygous state leads to ataxia resulting from selective, cell-autonomous apoptosis of cerebellar Purkinje cells during postnatal development. Mice homozygous for this mutation die shortly after birth from massive loss of mid- and hindbrain neurons during late embryogenesis. This protein also plays a role in synapse organization between parallel fibers and Purkinje cells. Alternate splicing results in multiple transcript variants encoding distinct isoforms. Mutations in this gene cause cerebellar ataxia in humans. [provided by RefSeq, Apr 2014]
Target gene [GRID2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6005197 chr4 0 71 22 93 View
6009506 chr4 14 18 4 36 View
6013446 chr4 11 4 4 19 View
6017167 chr4 7 4 0 11 View
6017168 chr4 7 4 0 11 View
6019572 chr4 8 0 0 8 View
6028874 chr4 1 0 0 1 View
6031126 chr4 0 0 0 0 View
6031145 chr4 0 0 0 0 View
6032917 chr4 0 0 0 0 View
6033027 chr4 0 0 0 0 View
6033049 chr4 0 0 0 0 View

Target gene [GRID2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - GRID2 peak across samples

Peak Plot