HTLV1 Target gene Detail Information

> GRIK5 Gene Search Result


Gene Information
Gene Name GRIK5
Gene ID 2901
Gene Full Name glutamate ionotropic receptor kainate type subunit 5
Gene Alias EAA2|GRIK2|GluK5|KA2
Transcripts ENSG00000105737
Virus HTLV1
Gene Type protein-coding
HPA Location Info Plasma membrane;Nucleoplasm;
Membrane Info FDA approved drug targets, Predicted membrane proteins, Transporters
Uniport_ID Q16478
HGNC ID HGNC:4583
OMIM ID 600283
Summary This gene encodes a protein that belongs to the glutamate-gated ionic channel family. Glutamate functions as the major excitatory neurotransmitter in the central nervous system through activation of ligand-gated ion channels and G protein-coupled membrane receptors. The protein encoded by this gene forms functional heteromeric kainate-preferring ionic channels with the subunits encoded by related gene family members. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2014]
Target gene [GRIK5] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003234 chr19 115 49 9 173 View
6006749 chr19 51 12 1 64 View
6006917 chr19 49 12 1 62 View

Target gene [GRIK5] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - GRIK5 peak across samples

Peak Plot