HTLV1 Target gene Detail Information

> GSE1 Gene Search Result


Gene Information
Gene Name GSE1
Gene ID 23199
Gene Full Name Gse1 coiled-coil protein
Gene Alias CRHSP24|KIAA0182
Transcripts ENSG00000131149
Virus HTLV1
Gene Type protein-coding
HPA Location Info Mitochondria;Nucleoplasm;
Membrane Info Predicted intracellular proteins
Uniport_ID Q14687
HGNC ID HGNC:28979
OMIM ID 616886
Summary This gene encodes a proline-rich protein with coiled coil domains that may be a subunit of a BRAF35-HDAC (BHC) histone deacetylase complex. This gene may function as an oncogene in breast cancer and enhanced expression of the encoded protein has been observed in breast cancer patients. [provided by RefSeq, May 2017]
Target gene [GSE1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000802 chr16 135 447 256 838 View
6001364 chr16 109 300 54 463 View
6001971 chr16 172 75 58 305 View
6002091 chr16 171 116 0 287 View
6004175 chr16 15 54 57 126 View
6007568 chr16 42 12 0 54 View
6008108 chr16 40 8 0 48 View
6014567 chr16 10 6 0 16 View
6014568 chr16 10 6 0 16 View
6016517 chr16 7 5 0 12 View
6019234 chr16 3 5 0 8 View
6022570 chr16 0 5 0 5 View
6028816 chr16 1 0 0 1 View
6030540 chr16 0 0 0 0 View

Target gene [GSE1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - GSE1 peak across samples

Peak Plot