HTLV1 Target gene Detail Information

> HACD2 Gene Search Result


Gene Information
Gene Name HACD2
Gene ID 201562
Gene Full Name 3-hydroxyacyl-CoA dehydratase 2
Gene Alias PTPLB
Transcripts ENSG00000206527
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Enzymes, Metabolic proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q6Y1H2
HGNC ID HGNC:9640
OMIM ID 615939
Summary The protein encoded by this gene can catalyze the third step (dehydration) in the conversion of long chain fatty acids to very long chain fatty acids. The encoded protein localizes to the endoplasmic reticulum membrane. [provided by RefSeq, Jul 2016]
Target gene [HACD2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6007402 chr3 40 10 6 56 View
6014651 chr3 12 4 0 16 View
6030371 chr3 0 0 0 0 View
6030431 chr3 0 0 0 0 View

Target gene [HACD2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - HACD2 peak across samples

Peak Plot