HTLV1 Target gene Detail Information

> HCN1 Gene Search Result


Gene Information
Gene Name HCN1
Gene ID 348980
Gene Full Name hyperpolarization activated cyclic nucleotide gated potassium channel 1
Gene Alias BCNG-1|BCNG1|DEE24|EIEE24|GEFSP10|HAC-2
Transcripts ENSG00000164588
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Disease related genes, Human disease related genes, Plasma proteins, Potential drug targets, Predicted membrane proteins, Transporters, Voltage-gated ion channels
Uniport_ID O60741
HGNC ID HGNC:4845
OMIM ID 602780
Summary The membrane protein encoded by this gene is a hyperpolarization-activated cation channel that contributes to the native pacemaker currents in heart and neurons. The encoded protein can homodimerize or heterodimerize with other pore-forming subunits to form a potassium channel. This channel may act as a receptor for sour tastes. [provided by RefSeq, Oct 2011]
Target gene [HCN1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6007440 chr5 33 3 19 55 View
6017893 chr5 10 0 0 10 View
6018257 chr5 3 6 0 9 View
6023470 chr5 1 3 0 4 View
6026574 chr5 1 1 0 2 View
6026988 chr5 1 1 0 2 View
6027792 chr5 0 2 0 2 View
6029339 chr5 1 0 0 1 View
6030526 chr5 0 0 0 0 View
6030569 chr5 0 0 0 0 View
6031716 chr5 0 0 0 0 View
6032881 chr5 0 0 0 0 View

Target gene [HCN1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - HCN1 peak across samples

Peak Plot