HTLV1 Target gene Detail Information

> HDLBP Gene Search Result


Gene Information
Gene Name HDLBP
Gene ID 3069
Gene Full Name high density lipoprotein binding protein
Gene Alias HBP|PRO2900|VGL
Transcripts ENSG00000115677
Virus HTLV1
Gene Type protein-coding
HPA Location Info Endoplasmic reticulum;Nuclear bodies;
Membrane Info Metabolic proteins, Plasma proteins, Predicted intracellular proteins
Uniport_ID Q00341
HGNC ID HGNC:4857
OMIM ID 142695
Summary The protein encoded by this gene binds high density lipoprotein (HDL) and may function to regulate excess cholesterol levels in cells. The encoded protein also binds RNA and can induce heterochromatin formation. [provided by RefSeq, Mar 2016]
Target gene [HDLBP] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6021864 chr2 3 2 0 5 View

Target gene [HDLBP] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - HDLBP peak across samples

Peak Plot