HCV Target gene Detail Information

> IFNL3 Gene Search Result


Gene Information
Gene Name IFNL3
Gene ID 282617
Gene Full Name interferon lambda 3
Gene Alias IFN-lambda-3|IFN-lambda-4|IL-28B|IL-28C|IL28B|IL28C
Transcripts ENSG00000197110
Virus HCV
Gene Type protein-coding
HPA Location Info Secreted to blood;
Membrane Info Predicted secreted proteins
Uniport_ID Q8IZI9
HGNC ID HGNC:18365
OMIM ID 607402
Summary This gene encodes a cytokine distantly related to type I interferons and the IL-10 family. This gene, interleukin 28A (IL28A), and interleukin 29 (IL29) are three closely related cytokine genes that form a cytokine gene cluster on a chromosomal region mapped to 19q13. Expression of the cytokines encoded by the three genes can be induced by viral infection. All three cytokines have been shown to interact with a heterodimeric class II cytokine receptor that consists of interleukin 10 receptor, beta (IL10RB) and interleukin 28 receptor, alpha (IL28RA). [provided by RefSeq, Jul 2008]
Target gene [IFNL3] related to virus gene/protein/region

Mutation Table: if previous studies reported that target gene was related to virus gene/region/protein, the information in this literature was listed in this section


ID PMID Mutation Gene/Protein/Region Encoding Gene/Protein Disease Description Detail
1 27812165 L159F
NS5B
NS5B
HCV Infection
D
G
R
C
L
T
View
2 27812165 C316N
NS5B
NS5B
HCV Infection
D
G
R
C
L
T
View
3 27812165 A421V
NS5B
NS5B
HCV Infection
D
G
R
C
L
T
View
4 26368554 Y93H
NS5A
NS5A
HCV Infection
G
C
L
T
View
5 27812165 L28M
NS5A
NS5A
HCV Infection
D
G
R
C
L
T
View
6 27812165 R30Q
NS5A
NS5A
HCV Infection
D
G
R
C
L
T
View
7 27812165 L31M
NS5A
NS5A
HCV Infection
D
G
R
C
L
T
View
8 27812165 P58S
NS5A
NS5A
HCV Infection
D
G
R
C
L
T
View
9 27812165 Y93H
NS5A
NS5A
HCV Infection
D
G
R
C
L
T
View
10 27812165 T54S
NS3
NS3
HCV Infection
D
G
R
C
L
T
View
11 27812165 R117H
NS3
NS3
HCV Infection
D
G
R
C
L
T
View
12 27812165 S122T
NS3
NS3
HCV Infection
D
G
R
C
L
T
View
13 27812165 S174F
NS3
NS3
HCV Infection
D
G
R
C
L
T
View
14 25438153 R155K
Protease
NS3
Hepatitis C, Chronic
D
G
R
C
L
T
View
15 25438153 V36M+R155K
Protease
NS3
Hepatitis C, Chronic
D
G
R
C
L
T
View
16 25438153 V36M
Protease
NS3
Hepatitis C, Chronic
D
G
R
C
L
T
View

Target gene [IFNL3] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_LIHC_HCV DNA methylation sequencing;RNA-seq 97 TCGA
GSE126831 RNA-seq 63 Illumina NextSeq 500 (Homo sapiens)
GSE103730 Chip-seq;RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE103728
Chip-seq 24 Illumina HiSeq 2500 (Homo sapiens)
GSE211161 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE103728 - IFNL3 peak across samples

Peak Plot