Virus Dataset Detail

> Detail information for each sample

Dataset Information
Accession GSE103730
Status 2018/9/12
Title High-resolution liver cancer genomic profiling links etiology, epigenetic and mutation signatures
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing;Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
Samples
GSM ID Sample info Characteristics Description
GSM2779861 H3K9Ac ChIP-seq from HCV infected cells repeat 1 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Acetyl-Histone H3 (Lys-9) Purified 17-658 (Millipore) -
GSM2779862 H3K9Ac ChIP- seq from non-infected cells repeat 1 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Acetyl-Histone H3 (Lys-9) Purified 17-658 (Millipore) -
GSM2779863 H3K9Ac ChIP-seq from HCV infected cells repeat 2 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Acetyl-Histone H3 (Lys-9) Purified 17-658 (Millipore) -
GSM2779864 H3K9Ac ChIP- seq from non-infected cells repeat 2 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Acetyl-Histone H3 (Lys-9) Purified 17-658 (Millipore) -
GSM2779865 H3K9Ac ChIP-seq from HCV infected cells repeat 3 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Acetyl-Histone H3 (Lys-9) Purified 17-658 (Millipore) -
GSM2779866 H3K9Ac ChIP- seq from non-infected cells repeat 3 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Acetyl-Histone H3 (Lys-9) Purified 17-658 (Millipore) -
GSM2779867 H3K4Me3 ChIP-seq from HCV infected cells repeat 1 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-4) 17-614 (Millipore) -
GSM2779868 H3K4Me3 ChIP- seq from non-infected cells repeat 1 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-4) 17-614 (Millipore) -
GSM2779869 H3K4Me3 ChIP-seq from HCV infected cells repeat 2 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-4) 17-614 (Millipore) -
GSM2779870 H3K4Me3 ChIP- seq from non-infected cells repeat 2 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-4) 17-614 (Millipore) -
GSM2779871 H3K4Me3 ChIP-seq from HCV infected cells repeat 3 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-4) 17-614 (Millipore) -
GSM2779872 H3K4Me3 ChIP- seq from non-infected cells repeat 3 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-4) 17-614 (Millipore) -
GSM2779873 H3K9Me3 ChIP-seq from HCV infected cells repeat 1 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-9) Purified 17-10242 (Millipore) -
GSM2779874 H3K9Me3 ChIP- seq from non-infected cells repeat 1 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-9) Purified 17-10242 (Millipore) -
GSM2779875 H3K9Me3 ChIP-seq from HCV infected cells repeat 2 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-9) Purified 17-10242 (Millipore) -
GSM2779876 H3K9Me3 ChIP- seq from non-infected cells repeat 2 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-9) Purified 17-10242 (Millipore) -
GSM2779877 H3K9Me3 ChIP-seq from HCV infected cells repeat 3 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-9) Purified 17-10242 (Millipore) -
GSM2779878 H3K9Me3 ChIP- seq from non-infected cells repeat 3 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-9) Purified 17-10242 (Millipore) -
GSM2779879 H3K27Me3 ChIP-seq from HCV infected cells rapeat 1 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-27) 07-449 (Millipore) -
GSM2779880 H3K27Me3 ChIP- seq from non-infected cells rapeat 1 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-27) 07-449 (Millipore) -
GSM2779881 H3K27Me3 ChIP-seq from HCV infected cells rapeat 2 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-27) 07-449 (Millipore) -
GSM2779882 H3K27Me3 ChIP- seq from non-infected cells rapeat 2 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-27) 07-449 (Millipore) -
GSM2779883 H3K27Me3 ChIP-seq from HCV infected cells rapeat 3 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-27) 07-449 (Millipore) -
GSM2779884 H3K27Me3 ChIP- seq from non-infected cells rapeat 3 tissue:liver; cell type:Huh-7.5; chip antibody:ChIPAb Trimethyl-Histone H3 (Lys-27) 07-449 (Millipore) -
GSM2779885 RNA-seq from HCV infected cells repeat1 tissue:liver; cell type:Huh-7.5 -
GSM2779886 RNA- seq from non-infected cells repeat 1 tissue:liver; cell type:Huh-7.5 -
GSM2779887 RNA-seq from HCV infected cells repeat 2 tissue:liver; cell type:Huh-7.5 -
GSM2779888 RNA- seq from non-infected cells repeat 2 tissue:liver; cell type:Huh-7.5 -
GSM2779889 RNA-seq from HCV infected cells repeat 3 tissue:liver; cell type:Huh-7.5 -
GSM2779890 RNA- seq from non-infected cells repeat 3 tissue:liver; cell type:Huh-7.5 -
GSM2779900 RNA-seq from control cells with treatment repeat 2 tissue:liver; cell type:Huh-7.5 -
GSM2779891 RNA-seq from HCV infected cells repeat 4 tissue:liver; cell type:Huh-7.5 -
GSM2779892 RNA- seq from non-infected cells repeat 4 tissue:liver; cell type:Huh-7.5 -
GSM2779901 RNA-seq from HCV infected and cured cells repeat 3 tissue:liver; cell type:Huh-7.5 -
GSM2779893 RNA-seq from HCV infected cells repeat 5 tissue:liver; cell type:Huh-7.5 -
GSM2779902 RNA-seq from control cells with treatment repeat 3 tissue:liver; cell type:Huh-7.5 -
GSM2779894 RNA- seq from non-infected cells repeat 5 tissue:liver; cell type:Huh-7.5 -
GSM2779895 RNA-seq from HCV infected cells repeat 6 tissue:liver; cell type:Huh-7.5 -
GSM2779896 RNA- seq from non-infected cells repeat 6 tissue:liver; cell type:Huh-7.5 -
GSM2779897 RNA-seq from HCV infected and cured cells repeat 1 tissue:liver; cell type:Huh-7.5 -
GSM2779898 RNA-seq from control cells with treatment repeat 1 tissue:liver; cell type:Huh-7.5 -
GSM2779899 RNA-seq from HCV infected and cured cells repeat 2 tissue:liver; cell type:Huh-7.5 -
Platform GPL16791  : Illumina HiSeq 2500 (Homo sapiens)
Literature 30698808  
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xCell Plot
* p<0.05 ** p<0.01