Gene Information
|
Gene Name
|
IFT140 |
|
Gene ID
|
9742
|
|
Gene Full Name
|
intraflagellar transport 140 |
|
Gene Alias
|
CED5|MZSDS|PKD9|RP80|SRTD9|WDTC2|c305C8.4|c380F5.1|gs114 |
|
Transcripts
|
ENSG00000187535
|
|
Virus
|
HTLV1 |
|
Gene Type
|
protein-coding |
|
HPA Location Info
|
Basal body;Nucleoplasm, Mitochondria; 
|
|
Membrane Info
|
Disease related genes, Human disease related genes, Predicted intracellular proteins |
|
Uniport_ID
|
Q96RY7
|
|
HGNC ID
|
HGNC:29077
|
|
OMIM ID
|
614620 |
|
Summary
|
This gene encodes one of the subunits of the intraflagellar transport (IFT) complex A. Intraflagellar transport is involved in the genesis, resorption and signaling of primary cilia. The primary cilium is a microtubule-based sensory organelle at the surface of most quiescent mammalian cells, that receives signals from its environment, such as the flow of fluid, light or odors, and transduces those signals to the nucleus. Loss of the corresponding protein in mouse results in renal cystic disease. [provided by RefSeq, Jun 2012] |
Target gene [IFT140] related to VISs 
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 6007466 |
chr16 |
41 |
12 |
2 |
55 |
View |
| 6018667 |
chr16 |
4 |
5 |
0 |
9 |
View |
| 6023086 |
chr16 |
3 |
1 |
0 |
4 |
View |
| 6023917 |
chr16 |
0 |
1 |
3 |
4 |
View |
Target gene [IFT140] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
GSE189602
|
Methylation profiling (Array) |
4 |
Infinium MethylationEPIC |
|
C GSE94732
|
Chip-seq |
24 |
Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens) |
|
GSE52244
|
Expression array |
15 |
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] |
|
GSE10789
|
Expression array |
6 |
NCI/ATC Hs-OperonV3 |
|
GSE224047
|
RNA-seq |
10 |
Illumina NextSeq 500 (Homo sapiens) |
|
GSE168557
|
Expression array |
6 |
Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version) |
|
GSE136189
|
Methylation profiling (Array) |
40 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip |
When the gene can detect a peak in the dataset, a peak plot will be displayed.
> Dataset: GSE94732 - IFT140 peak across samples
|
Peak Plot
|
|
|
HTLV1 Target gene Detail Information
