HTLV1 Target gene Detail Information

> ISM2 Gene Search Result


Gene Information
Gene Name ISM2
Gene ID 145501
Gene Full Name isthmin 2
Gene Alias TAIL1|THSD3
Transcripts ENSG00000100593
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;Centrosome, Cytosol;Secreted in female reproductive system;
Membrane Info Predicted secreted proteins
Uniport_ID Q6H9L7
HGNC ID HGNC:23176
OMIM ID 612684
Summary The protein encoded by this gene contains a type 1 thrombospondin domain, which is present in thrombospondin, a number of proteins involved in the complement pathway, as well as in extracellular matrix proteins. Two alternatively spliced transcript variants encoding distinct isoforms have been observed. [provided by RefSeq, Mar 2009]
Target gene [ISM2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6022134 chr14 4 1 0 5 View

Target gene [ISM2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ISM2 peak across samples

Peak Plot