HTLV1 Target gene Detail Information

> JADE3 Gene Search Result


Gene Information
Gene Name JADE3
Gene ID 9767
Gene Full Name jade family PHD finger 3
Gene Alias JADE-3|PHF16
Transcripts ENSG00000102221
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm, Nucleoli;
Membrane Info Predicted intracellular proteins
Uniport_ID Q92613
HGNC ID HGNC:22982
OMIM ID 300618
Summary This gene encodes a member of a family of large proteins containing PHD (plant homeo domain)-type zinc fingers. The encoded protein may be associated in a nuclear complex that functions in histone H4 acetylation. Alternative splicing results in multiple transcript variants encoding the same protein. [provided by RefSeq, Aug 2013]
Target gene [JADE3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6027250 chrX 1 1 0 2 View

Target gene [JADE3] related to Omics data
Data ID Experiment type Sample number Platform
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - JADE3 peak across samples

Peak Plot