HTLV1 Target gene Detail Information

> KCNIP1 Gene Search Result


Gene Information
Gene Name KCNIP1
Gene ID 30820
Gene Full Name potassium voltage-gated channel interacting protein 1
Gene Alias KCHIP1|VABP
Transcripts ENSG00000182132
Virus HTLV1
Gene Type protein-coding
HPA Location Info Vesicles;
Membrane Info Predicted intracellular proteins, Transporters
Uniport_ID Q9NZI2
HGNC ID HGNC:15521
OMIM ID 604660
Summary This gene encodes a member of the family of cytosolic voltage-gated potassium (Kv) channel-interacting proteins (KCNIPs), which belong to the neuronal calcium sensor (NCS) family of the calcium binding EF-hand proteins. They associate with Kv4 alpha subunits to form native Kv4 channel complexes. The encoded protein may regulate rapidly inactivating (A-type) currents, and hence neuronal membrane excitability, in response to changes in the concentration of intracellular calcium. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, May 2013]
Target gene [KCNIP1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002498 chr5 99 71 63 233 View
6009314 chr5 21 6 11 38 View
6016484 chr5 11 1 0 12 View

Target gene [KCNIP1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - KCNIP1 peak across samples

Peak Plot