HTLV1 Target gene Detail Information

> KCNIP4 Gene Search Result


Gene Information
Gene Name KCNIP4
Gene ID 80333
Gene Full Name potassium voltage-gated channel interacting protein 4
Gene Alias CALP|KCHIP4
Transcripts ENSG00000185774
Virus HTLV1
Gene Type protein-coding
HPA Location Info Vesicles;
Membrane Info Predicted intracellular proteins, Transporters
Uniport_ID Q6PIL6
HGNC ID HGNC:30083
OMIM ID 608182
Summary This gene encodes a member of the family of voltage-gated potassium (Kv) channel-interacting proteins (KCNIPs), which belong to the recoverin branch of the EF-hand superfamily. Members of the KCNIP family are small calcium binding proteins. They all have EF-hand-like domains, and differ from each other in the N-terminus. They are integral subunit components of native Kv4 channel complexes. They may regulate A-type currents, and hence neuronal excitability, in response to changes in intracellular calcium. This protein member also interacts with presenilin. Multiple alternatively spliced transcript variants encoding distinct isoforms have been identified for this gene. [provided by RefSeq, Jul 2008]
Target gene [KCNIP4] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004166 chr4 123 3 0 126 View
6004589 chr4 30 23 58 111 View
6004829 chr4 30 23 50 103 View
6004830 chr4 30 23 50 103 View
6005763 chr4 20 45 16 81 View
6007444 chr4 9 23 23 55 View
6010560 chr4 27 1 2 30 View
6012108 chr4 3 20 0 23 View
6012228 chr4 4 17 2 23 View
6013175 chr4 10 2 8 20 View
6013202 chr4 17 3 0 20 View
6014472 chr4 15 1 0 16 View
6015314 chr4 2 6 6 14 View
6017215 chr4 11 0 0 11 View
6025281 chr4 0 3 0 3 View
6027591 chr4 0 0 2 2 View
6028486 chr4 0 0 1 1 View
6031286 chr4 0 0 0 0 View

Target gene [KCNIP4] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - KCNIP4 peak across samples

Peak Plot