HBV Target gene Detail Information

> KIFAP3 Gene Search Result


Gene Information
Gene Name KIFAP3
Gene ID 22920
Gene Full Name kinesin associated protein 3
Gene Alias FLA3|KAP-1|KAP-3|KAP3|SMAP|Smg-GDS|dJ190I16.1
Transcripts ENSG00000075945
Virus HBV
Gene Type protein-coding
HPA Location Info Microtubules, Basal body;Nucleoplasm;
Membrane Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q92845
HGNC ID HGNC:17060
OMIM ID 601836
Summary The small G protein GDP dissociation stimulator (smg GDS) is a regulator protein having two activities on a group of small G proteins including the Rho and Rap1 family members and Ki-Ras; one is to stimulate their GDP/GTP exchange reactions, and the other is to inhibit their interactions with membranes. The protein encoded by this gene contains 9 'Armadillo' repeats and interacts with the smg GDS protein through these repeats. This protein, which is highly concentrated around the endoplasmic reticulum, is phosphorylated by v-src, and this phosphorylation reduces the affinity of the protein for smg GDS. It is thought that this protein serves as a linker between human chromosome-associated polypeptide (HCAP) and KIF3A/B, a kinesin superfamily protein in the nucleus, and that it plays a role in the interaction of chromosomes with an ATPase motor protein. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2011]
Target gene [KIFAP3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1040970 chr1 7 9 0 16 View
1040971 chr1 7 9 0 16 View
1040972 chr1 7 9 0 16 View
1040973 chr1 7 9 0 16 View
1040974 chr1 7 9 0 16 View
1040975 chr1 7 8 0 15 View

Target gene [KIFAP3] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465
Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE199850 scRNA-seq 1 HiSeq X Ten (Homo sapiens)
C
  GSE68402
Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE247322 scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130
Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257
ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - KIFAP3 peak across samples

Peak Plot


> Dataset: GSE68402 - KIFAP3 peak across samples

Peak Plot


> Dataset: GSE270130 - KIFAP3 peak across samples

Peak Plot


> Dataset: GSE131257 - KIFAP3 peak across samples

Peak Plot