HTLV1 Target gene Detail Information

> LGI2 Gene Search Result


Gene Information
Gene Name LGI2
Gene ID 55203
Gene Full Name leucine rich repeat LGI family member 2
Gene Alias LGIL2
Transcripts ENSG00000153012
Virus HTLV1
Gene Type protein-coding
HPA Location Info Centrosome;Secreted to blood;
Membrane Info Plasma proteins, Predicted secreted proteins
Uniport_ID Q8N0V4
HGNC ID HGNC:18710
OMIM ID 608301
Summary Predicted to be involved in inhibitory synapse assembly. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [LGI2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6031407 chr4 0 0 0 0 View

Target gene [LGI2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - LGI2 peak across samples

Peak Plot