HTLV1 Target gene Detail Information

> LIMCH1 Gene Search Result


Gene Information
Gene Name LIMCH1
Gene ID 22998
Gene Full Name LIM and calponin homology domains 1
Gene Alias LIMCH1A|LMO7B
Transcripts ENSG00000064042
Virus HTLV1
Gene Type protein-coding
HPA Location Info Actin filaments;
Membrane Info Predicted intracellular proteins
Uniport_ID Q9UPQ0
HGNC ID HGNC:29191
OMIM ID 617750
Summary Enables myosin II head/neck binding activity. Involved in several processes, including cytoplasmic actin-based contraction involved in cell motility; positive regulation of stress fiber assembly; and regulation of focal adhesion assembly. Located in myosin II complex and stress fiber. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [LIMCH1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6017040 chr4 7 1 3 11 View
6018706 chr4 5 1 3 9 View
6019423 chr4 4 1 3 8 View

Target gene [LIMCH1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - LIMCH1 peak across samples

Peak Plot