HPV Target gene Detail Information

> LINC00355 Gene Search Result


Gene Information
Gene Name LINC00355
Gene ID 144766
Gene Full Name long intergenic non-protein coding RNA 355
Gene Alias -
Transcripts ENSG00000227674
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:27061
lncRNASNP2 ID LINC00355
Target gene [LINC00355] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5004911 chr13 0 1 0 1 View
5005111 chr13 0 1 0 1 View
5010367 chr13 1 4 0 5 View
5010469 chr13 5 4 0 9 View
5010548 chr13 11 0 0 11 View

Target gene [LINC00355] related to Omics data
Data ID Experiment type Sample number Platform
GSE40774 Expression array 134 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LINC00355 peak across samples

Peak Plot