HTLV1 Target gene Detail Information

> LINC00649 Gene Search Result


Gene Information
Gene Name LINC00649
Gene ID 100506334
Gene Full Name long intergenic non-protein coding RNA 649
Gene Alias LINC00650|lnc-ITSN1-2
Transcripts ENSG00000237945
Virus HTLV1
Gene Type ncRNA
HGNC ID HGNC:44305
lncRNASNP2 ID LINC00649
Target gene [LINC00649] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004905 chr21 8 15 78 101 View

Target gene [LINC00649] related to Omics data
Data ID Experiment type Sample number Platform
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - LINC00649 peak across samples

Peak Plot