HPV Target gene Detail Information

> LINC01284 Gene Search Result


Gene Information
Gene Name LINC01284
Gene ID 101926971
Gene Full Name long intergenic non-protein coding RNA 1284
Gene Alias -
Transcripts ENSG00000230317
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:50342
lncRNASNP2 ID LINC01284
Target gene [LINC01284] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005258 chrX 10 2 3 15 View

Target gene [LINC01284] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LINC01284 peak across samples

Peak Plot