HPV Target gene Detail Information

> LINC01556 Gene Search Result


Gene Information
Gene Name LINC01556
Gene ID 729583
Gene Full Name long intergenic non-protein coding RNA 1556
Gene Alias C6orf100|dJ25J6.5
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:21195
Target gene [LINC01556] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5017716 chr6 6 9 0 15 View

Target gene [LINC01556] related to Omics data
Data ID Experiment type Sample number Platform
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE143026 ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)