HBV Target gene Detail Information

> LINGO2 Gene Search Result


Gene Information
Gene Name LINGO2
Gene ID 158038
Gene Full Name leucine rich repeat and Ig domain containing 2
Gene Alias LERN3|LRRN6C
Transcripts ENSG00000174482
Virus HBV
Gene Type protein-coding
HPA Location Info Cytoplasmic bodies;Nucleoplasm;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q7L985
HGNC ID HGNC:21207
OMIM ID 609793
Summary Predicted to act upstream of or within positive regulation of synapse assembly. Predicted to be located in membrane. Predicted to be active in several cellular components, including extracellular space; glutamatergic synapse; and synaptic membrane. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [LINGO2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005573 chr9 38 13 0 51 View
1005744 chr9 17 8 23 48 View
1008948 chr9 7 8 3 18 View
1008955 chr9 6 9 3 18 View
1008967 chr9 7 8 3 18 View
1008968 chr9 7 8 3 18 View
1008973 chr9 7 8 3 18 View
1008981 chr9 7 8 3 18 View
1009002 chr9 7 8 3 18 View
1009010 chr9 7 8 3 18 View
1012695 chr9 0 6 0 6 View
1012696 chr9 0 6 0 6 View
1013531 chr9 5 0 0 5 View
1016848 chr9 1 0 0 1 View
1016911 chr9 1 0 0 1 View
1016912 chr9 1 0 0 1 View
1016919 chr9 1 0 0 1 View
1016920 chr9 1 0 0 1 View
1016921 chr9 1 0 0 1 View
1016922 chr9 0 1 0 1 View
1017032 chr9 1 0 0 1 View
1017180 chr9 1 0 0 1 View
1017243 chr9 1 0 0 1 View
1018101 chr9 0 0 0 0 View
1018102 chr9 0 0 0 0 View
1018424 chr9 0 0 0 0 View
1020610 chr9 38 13 0 51 View
1022442 chr9 17 8 23 48 View
1041600 chr9 1 0 0 1 View
1043443 chr9 55 14 5 74 View
1043444 chr9 25 11 24 60 View

Target gene [LINGO2] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE247322 scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
 
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - LINGO2 expression across samples

Volcano Plot

Bar Plot