HTLV1 Target gene Detail Information

> LINGO2 Gene Search Result


Gene Information
Gene Name LINGO2
Gene ID 158038
Gene Full Name leucine rich repeat and Ig domain containing 2
Gene Alias LERN3|LRRN6C
Transcripts ENSG00000174482
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytoplasmic bodies;Nucleoplasm;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q7L985
HGNC ID HGNC:21207
OMIM ID 609793
Summary Predicted to act upstream of or within positive regulation of synapse assembly. Predicted to be located in membrane. Predicted to be active in several cellular components, including extracellular space; glutamatergic synapse; and synaptic membrane. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [LINGO2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6015484 chr9 4 10 0 14 View
6016604 chr9 5 7 0 12 View
6018269 chr9 7 2 0 9 View
6022419 chr9 0 3 2 5 View
6023298 chr9 4 0 0 4 View
6023476 chr9 4 0 0 4 View
6024550 chr9 3 0 0 3 View
6025055 chr9 3 0 0 3 View
6027184 chr9 2 0 0 2 View
6027185 chr9 2 0 0 2 View
6028800 chr9 1 0 0 1 View
6028825 chr9 0 0 1 1 View
6029027 chr9 1 0 0 1 View
6031860 chr9 0 0 0 0 View
6032272 chr9 0 0 0 0 View
6032534 chr9 0 0 0 0 View
6032535 chr9 0 0 0 0 View
6033001 chr9 0 0 0 0 View
6033273 chr9 0 0 0 0 View

Target gene [LINGO2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - LINGO2 peak across samples

Peak Plot