HTLV1 Target gene Detail Information

> LMBRD1 Gene Search Result


Gene Information
Gene Name LMBRD1
Gene ID 55788
Gene Full Name LMBR1 domain containing 1
Gene Alias C6orf209|LMBD1|MAHCF|NESI
Transcripts ENSG00000168216
Virus HTLV1
Gene Type protein-coding
HPA Location Info Vesicles;
Membrane Info Disease related genes, Human disease related genes, Potential drug targets, Predicted membrane proteins, Transporters
Uniport_ID Q9NUN5
HGNC ID HGNC:23038
OMIM ID 612625
Summary This gene encodes a lysosomal membrane protein that may be involved in the transport and metabolism of cobalamin. This protein also interacts with the large form of the hepatitis delta antigen and may be required for the nucleocytoplasmic shuttling of the hepatitis delta virus. Mutations in this gene are associated with the vitamin B12 metabolism disorder termed, homocystinuria-megaloblastic anemia complementation type F.[provided by RefSeq, Oct 2009]
Target gene [LMBRD1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6010642 chr6 30 0 0 30 View
6017038 chr6 1 6 4 11 View
6026439 chr6 0 2 0 2 View

Target gene [LMBRD1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - LMBRD1 peak across samples

Peak Plot