Gene Information
|
Gene Name
|
LMO7 |
|
Gene ID
|
4008
|
|
Gene Full Name
|
LIM domain 7 |
|
Gene Alias
|
FBX20|FBXO20|LMO7b|LOMP |
|
Transcripts
|
ENSG00000136153
|
|
Virus
|
HTLV1 |
|
Gene Type
|
protein-coding |
|
HPA Location Info
|
Actin filaments;Cytosol; 
|
|
Membrane Info
|
Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins |
|
Uniport_ID
|
Q8WWI1
|
|
HGNC ID
|
HGNC:6646
|
|
OMIM ID
|
604362 |
|
Summary
|
This gene encodes a protein containing a calponin homology (CH) domain, a PDZ domain, and a LIM domain, and may be involved in protein-protein interactions. Several alternatively spliced transcript variants encoding different isoforms have been found for this gene, however, the full-length nature of some variants is not known. [provided by RefSeq, Jan 2009] |
Target gene [LMO7] related to VISs 
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 6007172 |
chr13 |
3 |
56 |
0 |
59 |
View |
| 6011319 |
chr13 |
2 |
25 |
0 |
27 |
View |
| 6011320 |
chr13 |
2 |
25 |
0 |
27 |
View |
| 6020972 |
chr13 |
6 |
0 |
0 |
6 |
View |
Target gene [LMO7] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
GSE189602
|
Methylation profiling (Array) |
4 |
Infinium MethylationEPIC |
|
C GSE94732
|
Chip-seq |
24 |
Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens) |
|
GSE52244
|
Expression array |
15 |
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] |
|
GSE10789
|
Expression array |
6 |
NCI/ATC Hs-OperonV3 |
|
GSE224047
|
RNA-seq |
10 |
Illumina NextSeq 500 (Homo sapiens) |
|
GSE168557
|
Expression array |
6 |
Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version) |
|
GSE136189
|
Methylation profiling (Array) |
40 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip |
When the gene can detect a peak in the dataset, a peak plot will be displayed.
> Dataset: GSE94732 - LMO7 peak across samples
|
Peak Plot
|
|
|
HTLV1 Target gene Detail Information
