HPV Target gene Detail Information

> LMO7DN Gene Search Result


Gene Information
Gene Name LMO7DN
Gene ID 729420
Gene Full Name LMO7 downstream neighbor
Gene Alias C13orf45|LMO7DN-IT1
Transcripts ENSG00000178734
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:44370
Target gene [LMO7DN] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005108 chr13 21 2 0 23 View
5005409 chr13 19 0 0 19 View
5011823 chr13 1 0 0 1 View

Target gene [LMO7DN] related to Omics data
Data ID Experiment type Sample number Platform
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LMO7DN peak across samples

Peak Plot