HPV Target gene Detail Information

> LOC100506207 Gene Search Result


Gene Information
Gene Name LOC100506207
Gene ID 100506207
Gene Full Name -
Gene Alias -
Transcripts ENSG00000285219
Virus HPV
Gene Type ncRNA
Target gene [LOC100506207] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5004730 chr6 37 9 0 46 View
5005028 chr6 8 0 1 9 View
5005962 chr6 3 3 0 6 View
5006518 chr6 37 9 0 46 View
5006603 chr6 0 2 0 2 View
5010982 chr6 3 33 1 37 View

Target gene [LOC100506207] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - LOC100506207 peak across samples

Peak Plot

> Dataset: GSE143026 - LOC100506207 peak across samples

Peak Plot