HPV Target gene Detail Information

> LOC550113 Gene Search Result


Gene Information
Gene Name LOC550113
Gene ID 550113
Gene Full Name -
Gene Alias -
Virus HPV
Gene Type ncRNA
Target gene [LOC550113] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5017612 chr4 117 22 1 140 View
5017613 chr4 56 76 50 182 View
5017614 chr4 137 57 20 214 View

Target gene [LOC550113] related to Omics data
Data ID Experiment type Sample number Platform
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LOC550113 peak across samples

Peak Plot