HTLV1 Target gene Detail Information

> LPCAT1 Gene Search Result


Gene Information
Gene Name LPCAT1
Gene ID 79888
Gene Full Name lysophosphatidylcholine acyltransferase 1
Gene Alias AGPAT10|AGPAT9|AYTL2|LPCAT-1|LPLAT8|PFAAP3|lpcat|lysoPAFAT
Transcripts ENSG00000153395
Virus HTLV1
Gene Type protein-coding
HPA Location Info Endoplasmic reticulum;Lipid droplets;
Membrane Info Enzymes, Metabolic proteins, Predicted membrane proteins
Uniport_ID Q8NF37
HGNC ID HGNC:25718
OMIM ID 610472
Summary This gene encodes a member of the 1-acyl-sn-glycerol-3-phosphate acyltransferase family of proteins. The encoded enzyme plays a role in phospholipid metabolism, specifically in the conversion of lysophosphatidylcholine to phosphatidylcholine in the presence of acyl-CoA. This process is important in the synthesis of lung surfactant and platelet-activating factor (PAF). Elevated expression of this gene may contribute to the progression of oral squamous cell, prostate, breast, and other human cancers. [provided by RefSeq, Sep 2016]
Target gene [LPCAT1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002801 chr5 208 0 0 208 View
6005404 chr5 88 0 0 88 View
6009435 chr5 11 25 1 37 View

Target gene [LPCAT1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - LPCAT1 peak across samples

Peak Plot