HTLV1 Target gene Detail Information

> LRFN5 Gene Search Result


Gene Information
Gene Name LRFN5
Gene ID 145581
Gene Full Name leucine rich repeat and fibronectin type III domain containing 5
Gene Alias C14orf146|FIGLER8|SALM5
Transcripts ENSG00000165379
Virus HTLV1
Gene Type protein-coding
HPA Location Info Intracellular and membrane;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q96NI6
HGNC ID HGNC:20360
OMIM ID 612811
Summary This gene encodes a protein that belongs to the leucine-rich repeat and fibronectin type III domain-containing family of proteins. A similar protein in mouse, a glycosylated transmembrane protein, is thought to function in presynaptic differentiation. [provided by RefSeq, Sep 2016]
Target gene [LRFN5] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6020922 chr14 3 2 1 6 View
6026076 chr14 2 0 0 2 View
6030037 chr14 1 0 0 1 View

Target gene [LRFN5] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - LRFN5 peak across samples

Peak Plot