HTLV1 Target gene Detail Information

> LRIF1 Gene Search Result


Gene Information
Gene Name LRIF1
Gene ID 55791
Gene Full Name ligand dependent nuclear receptor interacting factor 1
Gene Alias C1orf103|FSHD3|HBiX1|RIF1
Transcripts ENSG00000121931
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;Centriolar satellite;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q5T3J3
HGNC ID HGNC:30299
OMIM ID 615354
Summary Predicted to enable nuclear retinoic acid receptor binding activity. Involved in dosage compensation by inactivation of X chromosome. Located in centriolar satellite; chromosome, telomeric region; and nuclear lumen. Implicated in facioscapulohumeral muscular dystrophy 3. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [LRIF1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6020896 chr1 1 5 0 6 View

Target gene [LRIF1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - LRIF1 peak across samples

Peak Plot