HTLV1 Target gene Detail Information

> LRIG2 Gene Search Result


Gene Information
Gene Name LRIG2
Gene ID 9860
Gene Full Name leucine rich repeats and immunoglobulin like domains 2
Gene Alias LIG-2|LIG2|UFS2
Transcripts ENSG00000198799
Virus HTLV1
Gene Type protein-coding
HPA Location Info Golgi apparatus;Nucleoplasm;
Membrane Info Disease related genes, Human disease related genes, Predicted membrane proteins
Uniport_ID O94898
HGNC ID HGNC:20889
OMIM ID 608869
Summary This gene encodes a transmembrane protein containing leucine-rich repeats and immunoglobulin-like domains. The encoded protein promotes epidermal growth factor signalling, resulting in increased proliferation. Its expression in the cytoplasm of glioma cells is correlated with poor survival. Mutations in this gene can cause urofacial syndrome. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2015]
Target gene [LRIG2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000066 chr1 4167 1076 439 5682 View
6022156 chr1 5 0 0 5 View

Target gene [LRIG2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - LRIG2 peak across samples

Peak Plot