HTLV1 Target gene Detail Information

> LRRTM4 Gene Search Result


Gene Information
Gene Name LRRTM4
Gene ID 80059
Gene Full Name leucine rich repeat transmembrane neuronal 4
Gene Alias -
Transcripts ENSG00000176204
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID Q86VH4
HGNC ID HGNC:19411
OMIM ID 610870
Summary Predicted to enable heparan sulfate proteoglycan binding activity. Predicted to be involved in regulation of synapse assembly. Predicted to act upstream of or within AMPA glutamate receptor clustering; positive regulation of synapse assembly; and regulation of presynaptic membrane organization. Predicted to be located in postsynaptic membrane. Predicted to be part of AMPA glutamate receptor complex. Predicted to be active in several cellular components, including GABA-ergic synapse; photoreceptor ribbon synapse; and postsynaptic density membrane. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [LRRTM4] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6007182 chr2 58 1 0 59 View
6009193 chr2 3 33 3 39 View
6017679 chr2 0 10 0 10 View
6022159 chr2 5 0 0 5 View
6026046 chr2 2 0 0 2 View
6029271 chr2 1 0 0 1 View
6032447 chr2 0 0 0 0 View
6032673 chr2 0 0 0 0 View
6032674 chr2 0 0 0 0 View
6033540 chr2 0 0 0 0 View

Target gene [LRRTM4] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - LRRTM4 peak across samples

Peak Plot