HTLV1 Target gene Detail Information

> LTN1 Gene Search Result


Gene Information
Gene Name LTN1
Gene ID 26046
Gene Full Name listerin E3 ubiquitin protein ligase 1
Gene Alias C21orf10|C21orf98|RNF160|ZNF294
Transcripts ENSG00000198862
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;
Membrane Info Enzymes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID O94822
HGNC ID HGNC:13082
OMIM ID 613083
Summary Like most RING finger proteins, LTN1 functions as an E3 ubiquitin ligase (Chu et al., 2009 [PubMed 19196968]).[supplied by OMIM, Nov 2010]
Target gene [LTN1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6014044 chr21 3 9 5 17 View

Target gene [LTN1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - LTN1 peak across samples

Peak Plot