HTLV1 Target gene Detail Information

> NAV3 Gene Search Result


Gene Information
Gene Name NAV3
Gene ID 89795
Gene Full Name neuron navigator 3
Gene Alias POMFIL1|STEERIN3|unc53H3
Transcripts ENSG00000067798
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nuclear membrane;Cytosol;
Membrane Info Cancer-related genes, Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q8IVL0
HGNC ID HGNC:15998
OMIM ID 611629
Summary This gene belongs to the neuron navigator family and is expressed predominantly in the nervous system. The encoded protein contains coiled-coil domains and a conserved AAA domain characteristic for ATPases associated with a variety of cellular activities. This gene is similar to unc-53, a Caenorhabditis elegans gene involved in axon guidance. Multiple alternatively spliced transcript variants for this gene have been described but only one has had its full-length nature determined. [provided by RefSeq, Jul 2008]
Target gene [NAV3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001163 chr12 24 232 300 556 View
6010321 chr12 30 2 0 32 View
6010497 chr12 1 9 21 31 View
6015035 chr12 10 5 0 15 View
6015819 chr12 1 2 10 13 View
6018177 chr12 7 1 1 9 View
6018931 chr12 6 2 0 8 View
6019756 chr12 5 0 2 7 View
6025804 chr12 0 3 0 3 View
6028698 chr12 1 0 0 1 View

Target gene [NAV3] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
M
  GSE136189
Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE94732 - NAV3 peak across samples

Peak Plot