HBV Target gene Detail Information

> NBEA Gene Search Result


Gene Information
Gene Name NBEA
Gene ID 26960
Gene Full Name neurobeachin
Gene Alias BCL8B|LYST2|NEDEGE
Transcripts ENSG00000172915
Virus HBV
Gene Type protein-coding
HPA Location Info Golgi apparatus;Cytosol;
Membrane Info Disease related genes, Human disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q8NFP9
HGNC ID HGNC:7648
OMIM ID 604889
Summary This gene encodes a member of a large, diverse group of A-kinase anchor proteins that target the activity of protein kinase A to specific subcellular sites by binding to its type II regulatory subunits. Brain-specific expression and coat protein-like membrane recruitment of a highly similar protein in mouse suggest an involvement in neuronal post-Golgi membrane traffic. Mutations in this gene may be associated with a form of autism. This gene and its expression are frequently disrupted in patients with multiple myeloma. Alternative splicing results in multiple transcript variants encoding distinct isoforms. Additional transcript variants may exist, but their full-length nature has not been determined.[provided by RefSeq, Feb 2011]
Target gene [NBEA] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005961 chr13 45 0 0 45 View
1014401 chr13 2 1 0 3 View
1016348 chr13 0 1 0 1 View
1017852 chr13 0 0 0 0 View
1021842 chr13 0 0 0 0 View
1021843 chr13 0 1 0 1 View
1023279 chr13 2 1 0 3 View
1040912 chr13 0 1 1 2 View
1041085 chr13 86 18 41 145 View
1041086 chr13 105 24 63 192 View
1041087 chr13 105 25 66 196 View
1041088 chr13 5 204 14 223 View
1041089 chr13 0 1 1 2 View
1042027 chr13 1 2 0 3 View
1042028 chr13 32 1 0 33 View
1042029 chr13 3 1 0 4 View

Target gene [NBEA] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
S
  GSE247322 		scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
 
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - NBEA expression across samples

Volcano Plot

Bar Plot