HTLV1 Target gene Detail Information

> NDFIP1 Gene Search Result


Gene Information
Gene Name NDFIP1
Gene ID 80762
Gene Full Name Nedd4 family interacting protein 1
Gene Alias N4WBP5
Transcripts ENSG00000131507
Virus HTLV1
Gene Type protein-coding
HPA Location Info Intracellular and membrane;
Membrane Info Predicted membrane proteins
Uniport_ID Q9BT67
HGNC ID HGNC:17592
OMIM ID 612050
Summary The protein encoded by this gene belongs to a small group of evolutionarily conserved proteins with three transmembrane domains. It is a potential target for ubiquitination by the Nedd4 family of proteins. This protein is thought to be part of a family of integral Golgi membrane proteins. [provided by RefSeq, Jul 2008]
Target gene [NDFIP1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6006275 chr5 17 9 45 71 View
6006276 chr5 17 9 45 71 View
6006277 chr5 17 9 45 71 View
6006278 chr5 17 9 45 71 View
6006279 chr5 17 9 45 71 View
6006280 chr5 17 9 45 71 View

Target gene [NDFIP1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - NDFIP1 peak across samples

Peak Plot