HPV Target gene Detail Information

> NDUFC2-KCTD14 Gene Search Result


Gene Information
Gene Name NDUFC2-KCTD14
Gene ID 100532726
Gene Full Name NDUFC2-KCTD14 readthrough
Gene Alias -
Transcripts ENSG00000259112
Virus HPV
Gene Type protein-coding
HPA Location Info Mitochondria;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID E9PQ53
HGNC ID HGNC:42956
Summary This locus represents naturally occurring read-through transcription between the neighboring NDUFC2 (NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa) and KCTD14 (potassium channel tetramerisation domain containing 14) genes on chromosome 11. The read-through transcripts share sequence identity with the upstream gene product and one variant has a frameshifted C-terminal region derived from the downstream gene exons. [provided by RefSeq, Feb 2011]
Target gene [NDUFC2-KCTD14] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5010295 chr11 0 0 0 0 View

Target gene [NDUFC2-KCTD14] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - NDUFC2-KCTD14 peak across samples

Peak Plot

> Dataset: GSE143026 - NDUFC2-KCTD14 peak across samples

Peak Plot