HBV Target gene Detail Information

> NKAIN2 Gene Search Result


Gene Information
Gene Name NKAIN2
Gene ID 154215
Gene Full Name sodium/potassium transporting ATPase interacting 2
Gene Alias FAM77B|NKAIP2|TCBA|TCBA1
Transcripts ENSG00000188580
Virus HBV
Gene Type protein-coding
HPA Location Info Cytosol;
Membrane Info Disease related genes, Potential drug targets, Predicted membrane proteins, Transporters
Uniport_ID Q5VXU1
HGNC ID HGNC:16443
OMIM ID 609758
Summary This gene encodes a transmembrane protein that interacts with the beta subunit of a sodium/potassium-transporting ATPase. A chromosomal translocation involving this gene is a cause of lymphoma. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Jul 2014]
Target gene [NKAIN2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004249 chr6 1 61 25 87 View
1006603 chr6 28 1 7 36 View
1011039 chr6 1 0 9 10 View
1011771 chr6 1 0 7 8 View
1013103 chr6 5 0 0 5 View
1014484 chr6 3 0 0 3 View
1019335 chr6 0 0 0 0 View
1019619 chr6 0 0 0 0 View
1021182 chr6 3 0 0 3 View
1022147 chr6 5 0 0 5 View
1024296 chr6 9 1 0 10 View
1043186 chr6 3 0 0 3 View

Target gene [NKAIN2] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE247322 scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
 
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - NKAIN2 expression across samples

Volcano Plot

Bar Plot