HTLV1 Target gene Detail Information

> NLGN1 Gene Search Result


Gene Information
Gene Name NLGN1
Gene ID 22871
Gene Full Name neuroligin 1
Gene Alias NL1|NLG1
Transcripts ENSG00000169760
Virus HTLV1
Gene Type protein-coding
HPA Location Info Plasma membrane;Nuclear bodies;Intracellular and membrane;
Membrane Info Disease related genes, Human disease related genes, Potential drug targets, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID Q8N2Q7
HGNC ID HGNC:14291
OMIM ID 600568
Summary This gene encodes a member of a family of neuronal cell surface proteins. Members of this family may act as splice site-specific ligands for beta-neurexins and may be involved in the formation and remodeling of central nervous system synapses. [provided by RefSeq, Jul 2008]
Target gene [NLGN1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6010348 chr3 22 9 0 31 View
6024530 chr3 2 1 0 3 View
6026003 chr3 1 1 0 2 View
6027728 chr3 0 2 0 2 View
6031630 chr3 0 0 0 0 View
6032169 chr3 0 0 0 0 View

Target gene [NLGN1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - NLGN1 peak across samples

Peak Plot