HTLV1 Target gene Detail Information

> NOCT Gene Search Result


Gene Information
Gene Name NOCT
Gene ID 25819
Gene Full Name nocturnin
Gene Alias CCR4L|CCRN4L|Ccr4c|NOC
Transcripts ENSG00000151014
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nuclear bodies;Nucleoplasm, Cytosol;
Membrane Info Enzymes, Predicted intracellular proteins
Uniport_ID Q9UK39
HGNC ID HGNC:14254
OMIM ID 608468
Summary The protein encoded by this gene is highly similar to Nocturnin, a gene identified as a circadian clock regulated gene in Xenopus laevis. This protein and Nocturnin protein share similarity with the C-terminal domain of a yeast transcription factor, carbon catabolite repression 4 (CCR4). The mRNA abundance of a similar gene in mouse has been shown to exhibit circadian rhythmicity, which suggests a role for this protein in clock function or as a circadian clock effector. [provided by RefSeq, Jul 2008]
Target gene [NOCT] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6027908 chr4 0 1 0 1 View

Target gene [NOCT] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - NOCT peak across samples

Peak Plot