HTLV1 Target gene Detail Information

> NPAS3 Gene Search Result


Gene Information
Gene Name NPAS3
Gene ID 64067
Gene Full Name neuronal PAS domain protein 3
Gene Alias MOP6|PASD6|bHLHe12
Transcripts ENSG00000151322
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Disease related genes, Predicted intracellular proteins, Transcription factors
Uniport_ID Q8IXF0
HGNC ID HGNC:19311
OMIM ID 609430
Summary This gene encodes a member of the basic helix-loop-helix and PAS domain-containing family of transcription factors. The encoded protein is localized to the nucleus and may regulate genes involved in neurogenesis. Chromosomal abnormalities that affect the coding potential of this gene are associated with schizophrenia and cognitive disability. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Sep 2009]
Target gene [NPAS3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6009084 chr14 8 10 21 39 View
6009419 chr14 22 12 3 37 View
6010078 chr14 12 15 6 33 View
6013893 chr14 15 3 0 18 View
6021394 chr14 3 3 0 6 View
6022777 chr14 1 4 0 5 View
6025226 chr14 0 3 0 3 View
6029426 chr14 0 1 0 1 View
6032589 chr14 0 0 0 0 View

Target gene [NPAS3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - NPAS3 peak across samples

Peak Plot