HTLV1 Target gene Detail Information

> NPSR1-AS1 Gene Search Result


Gene Information
Gene Name NPSR1-AS1
Gene ID 404744
Gene Full Name NPSR1 antisense RNA 1
Gene Alias AAA1
Transcripts ENSG00000197085
Virus HTLV1
Gene Type ncRNA
HGNC ID HGNC:22128
OMIM ID 608596
lncRNASNP2 ID NPSR1-AS1
Summary This gene is located within a region that has been associated with asthma susceptibility. The locus is considered non-protein-coding based on lack of protein homology and a lack of experimental support for an encoded protein. Three alternatively spliced transcript variants have been identified for this gene. [provided by RefSeq, May 2010]
Target gene [NPSR1-AS1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001153 chr7 155 272 136 563 View
6012519 chr7 19 3 0 22 View
6018012 chr7 0 10 0 10 View

Target gene [NPSR1-AS1] related to Omics data
Data ID Experiment type Sample number Platform
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - NPSR1-AS1 peak across samples

Peak Plot